IntegromeDB collects all the biomedical, biochemical, drug, disease and health related data available in the public domain and brings you the most relevant data for your search. It provides you with an integrative view on the genomic, proteomic, transcriptomic, genetic and functional information featuring gene/protein names, synonyms and alternative IDs, gene function, orthologies, gene expression, pathways and molecular (protein-protein, TF-gene, genetic, etc.) interactions, mutations and SNPs, disease relationships, drugs and compounds, and many other. Explore and enjoy!

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P53 EGFR NFKB1
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Organisms	Top attributes	Attributes
Arabidopsis thaliana Escherichia coli Mycoplasma pneumoniae M129 Bos taurus Homo sapiens Caenorhabditis elegans Schizosaccharomyces pombe Drosophila melanogaster Zea mays Mus musculus Chlamydomonas reinhardtii Takifugu rubripes Saccharomyces cerevisiae Dictyostelium discoideum Plasmodium falciparum Zea mays subsp. mays Xenopus sp. Hepatitis C virus Oryza sativa Pneumocystis carinii Rattus norvegicus	SYNONYMS DESCRIPTION NAME go_function go_component go_process	entrez_id ensembl_id external_id protein_id aliases protein_sequence pubmedid NCBI-ID uniprotkb_id hgnc_id OREF associatedWith COMMENT gene_property XREF UID kegg_link kegg_id kegg_reaction IMAGE AVAILABILITY TableValue DATA-SOURCE Place PublicationID clone_name type ID METADATA identifier AUTHORS species_id species prod experimenter proteintablelink tss channel1 table_name plant_group cds subset meta_data unit_for_activityexpression subset_property idcode activityvalue interactor2 classification tipconfiguration minister taxon_link sequence_id entry_pkey web_link sitename species_english pubmed_id medline activityname tip_configuration gene_ontology scanning_parameters scanning_software clone_id phylogenetic country entryinfo region sequencesuperimpositionpointer tel row_spacing ac datemodified links scanningsoftware end_of_entry kingdom category fasta_alignment sequence_lenght ac_line datecreated gene_ontology_link dna_sequence columnspacing sequencesuperimpositionname genomeregionname dialign_alignment utr column_spacing celltablelink interactor_2 department subcategory interactor_1 entityid ORGOBJECTS slidename Abbreviation rowspersector software_version rowspacing rows_per_sector DIRECTION epd_fkey length official_name species_latin me_line de_line laboratory experimentid cds_note gene_names experiment_id se_line fax experimenteremail email interactor1 entityname consensus sitevariant softwareversion alternative_tsss printname experimenter_email columnspersector institute taxon sq cluster date_modified columns_per_sector channel2 sysnonyms genelink cv date_created scanningparameters kw_line address kegg_pathway ORGANISM kegg_name score strand SEQUENCE second_position_of_the_putative_binding_site name_of_our_simple_computational_program entitydependence empty_required_by_the_gff_format sequence_name first_position_of_the_putative_binding_site the_sequence_of_the_binding_site keywords TITLE YEAR cardid cc databaselink note end chromosome reference annotation comments entrez_geneid reference_authors database_references status chromosome_location reference_title position publication_id fullname pmid accession_number assembly tf_id chr gene_name weightpicking cross_links_fkey synonym_property fg weightwidth gene_id location sc genename weightid domain schemename rnaiexperimentid genewormbaseid wormbaseid motif evidence_property homologous_genes protein_similarities cell_type alternative_promoter_id tfname targettype targetname feature_header selected_reprentative_tss relationtype bloc t7primer targetgenemodule reference_external_database_7 reference_criteria reference_external_database_5 end0 reference_external_database_6 fuzzy_start pazar_id3 type_evid pazar_id2 total_number_of_promoter_in_the_genegroup first_name verdict_dna_bd pazar_id6 pazar_id5 pazar_id4 pazar_id9 date_author pazar_id8 sequence0 position_of_the_5end_of_the_refseq_cds weblink reference_external_database_4 codingstart reference_external_database_3 reference_external_database_2 eloc number_of_cdnas_mapped_at_the_indiacated_tss dbtss_genegroup_promoter_id fuzzy_end reference_literature_data_2 pepdata rawscore reference_literature_data_6 reference_literature_data_5 quantitative reference_literature_data_4 reference_literature_data_3 class_property reference_literature_data_7 cell_property db_name reference_criteria_2 flybase_pkey tfbs_name reference_criteria_4 reference_criteria_3 reference_criteria_6 reference_criteria_5 target_gene_module reference_criteria_7 mt sequence_of_promoter inputs resultingdata reference_literature_data pazar_id18 scale pazar_id19 pazar_id16 entryname status14 pazar_id15 pazar_id12 pazar_id13 pazar_id11 evidencelinestypesubtypecelltype library_type reference_title_3 number_of_mapped_fulllength_cdnas reference_title_4 target_gene_name db_name8 reference_title_2 db_name7 reference_title_7 reference_title_5 reference_title_6 outputs trs entry_fkey entryid reference_external_database position0 ihop pazar_id21 au exonend assembly7 total_ic assembly6 schemeid status_evid sequencelength method0 locationofthesiteinvestigated edit_date last_name assembly10 wormbase_id number_of_confident_cdnas begin0 quality an evidence_lines_type_subtype_celltype predominant_start targetend targetstart phenotypeassociatedwithmutation pazar_id exonstart t3primer reference_authors_7 reference_authors_6 sequenceacc exon number_of_mapped_full_length_cdnas reference_authors_2 domain0 reference_authors_3 reference_authors_4 description4 reference_authors_5 jaspar codingend qualitative db_name11 verdict_tf username sa project_name funct_tf_name uniq_id_2 targetgenename literaturereference DomainID ligandname ro year0 SOURCE sequence_element_id start citation locus_tag frame db_xref inference gene_synonym experiment allele internal_data old_locus_tag database clone product pseudo function number gene_symbol alignment seq_property class binding_site bs_id updated subfamily sp_id shipment f_forward_coding_strand_r_reverse_complement_strand promoter_sequence_75_25_to_transcriptinal_start_site ec_number standard_name mgd_pkey refseq_id uniprot unit cds_id mgd_ac version pg ec symbol _5_flanking_gene expr_num operon seq pur_protocol sequence_length protein_size inducer_repressor fbgn trans_splicing label exception reactionlist regulatoryeventlist entitylist genenetdynamicmodel species_url references_url remarks link author bsname selenocysteine kegg_pathways unigene_cluster_id normalizedlogratio2ofmean experimentuid number_of_sequences calculatedpi template instability lit_reference molecularweight issue reactiontype unknown6 summaries_entrezgene target_start end_relative_to_tss input0 generiftext drugs_compounds_pubmed_ids_t5 summaries_ncbi_link rnintegration databaselink_url pubmed_comments transcripts_additional_cdna_sequence pathways_interactions_go_id_from_go_table_link gene_location_hgnc summeries_uniprot_link transcripts_splice_patterns_link day1 protein_domains_families_protonet_protein_and_cluster day2 func specialized_databases_showing_leiden_link disorders_mutations_disease_from_table pathways_interactions_qualified_go_term_from_go_table gene_function_qualified_go_term_from_go_table t3_primer fforwardcodingstrandrreversecomplementstrand exon_end modifications proteins_human_recombinant_proteins_link genome_databases_showing_eugenes_link proteins_evidence_t1 multimerizationlevel transcripts_origene_29mer_shrna_kit_in_gfp_retroviral_vectors gene_loc_link schemelink references0 transcripts_ensembl_transcripts_including_schematic_representat summeries_entrezgene gene_function_origene_29mer_shrna_kit_in_gfpretroviral_vectors id_line publications_articles familyid name12 aminoacid_sequence creation annotations orthologs_organism_t7 protein_external_id bs_name gene_location_ensembl_cytogenetic_link disorders_mutations_pubmed_ids_for_articles_with_shared_sentenc specialized_databases_showing_uniprotkb_swiss-prot_link drugs_compounds_compound_t5 pathways_interactions_evidence_from_go_table reviewer_commments schemeconstantlink expression_geneannot_data_specificity_t6 judgement expression_according_link gapp transcripts_splicing_isoforms_link genome_databases_showing protein_domains_similarity transcription_start_site transcripts_highest_scoring_ests shortname proteins_qualified_go_term_t1 calculated_pi proteins_pdb_structures_from_proteopedia_link gene_location_ensembl transcripts_schematic_representations_link taxa display_sequence_to orthologs_ensembl_gene_tree snps_variants_hapmap_linkage_disequilibrium molecular_weight entitynameurl paralogs pathways_interactions_evidence_go_t3 drugs_compounds_compounds_from_biomol orthologs_locus_from_table epd_pos proteins_go_id_from_go_table genome_databases_showing_ecgene_link publications_articles_link schemereactionlink pathways_interactions_go_id_from_go_table output0 proteins_mass_spectrometry epd_ac homology_fkey gene_function_origene_myc_ddk_tagged_cdna_clones_in_cmv_express creation_lines_pkey PHENOTYPE_TYPE bs_genome_start fb_ac proteins_cofactor nm_ids genome_databases_showing_h-invdb_link expression_data_from_source_genereport_for_unigene_cluster genome_databases_showing_entrez_gene_link alias0 specialized_databases_showing_mtdb_link cdsgenename drugs_compounds_compound_t4 uniq_id proteins_link proteins_sequence_caution orthologs_human_similarity_from_table drugs_compounds_cas_number_t4 expression_genetide_data_rank_t6 signa display_sequence_from initialentityconcentration protein_domains_families_interpro mins pathways_interactions_invitrogen_ipath expression_data_from_symatlas db_accn12 protein_domains_families_uniprotkb_domain transfac proteins_ensembl_proteins_link gene_wormbase_id kw name20 bs_seq gene_function_evidence_from_go_table dt_line_fkey gene_function_go_id_t2 gene_function_function annotation_lines_pkey promoter_sequence_75__25_to_transcriptinal_start_site t7_primer reactionname text epd_id proteins_phosphosite pathways_interactions_kegg_pathways summaries_wiki_link orthologs_description_t7 transl_except translation do2_line proteins_recommended_name gene_location_entrez_gene rnai_experiment_id medical_news compartment maxs transcripts_geneloc_exon_structure_link fasta_sequence proteins_post_translational_modifications evidence_strength bindingsite proteins_miscellaneous definition_gene dataset normalized_log_ratio2_of_mean expression_genetide_data_consensus_t6 gene_fullname proteins_go_id_t1 expression_geneannot_data_genes_t6 expression_binary_patterns_link proteins_pubmed_ids_t1 protein_domains_families_graphical_view_of_domain_structure drugs_compounds_compound_score_t5 celltablelink_url schemenameurl organismswithorthologs target_end proteins_post_translational_modifications_link homology_description_pkey previous_gc_identifer gene_function_induction id_line_pkey proteins_pubmed_ids_from_go_table transcripts_refseq_mrnas_for_app_gene de_line_pkey regulated_operon swissprot_pkey gene_function_evidence_from_go_t2 ensembl_pkey Alignment.PDBrange genome_databases_showing_mirbase_link cdsid Alignment.align protein_domains_families_protonet_link Modeling.PSQSScore Alignment.ZScore cds_gene_name reviewer prob Alignment.Ident PDBid expression_applied_biosystems_taqman_gene_expression_assays bs_motif Modeling.ModelingMethod flankinggene rng gene_location_start gene_location_size MATERNAL_PHENOTYPE_ID isTransmembrame ipi expression_unigene_cluster_link Alignment.TMrange expression_genetide_data_uniqueness_t6 gene_type volumenumber ca gene_function_sirna orthologs_human_similarity_t7 schemeentitylink Alignment.AlignMethod promoters bs_color orthologs_locus_t7 smart_url PHENOTYPE_ID target_type orthologs_description_from_table mcs expression_array_t6 disorders_mutations_disease_from_t8 ml gene_function_clones_link protein_domains_families_interpro_link experiment_uid coding_start transcripts_aceview_cdna_sequences reactiondescription relation_property start_relative_to_tss orthologs influencetype site_type protein_domains_families_uniprotkb_similarity gene_location_view_link expression_affymetrix_probe_set_t6 pathways_interactions_go_id_t3 qualitative17 year2 summeries_function gene_location_hgnc_cytogenetic_link year1 proteins_subunit snps_variants_ncbi_snps_link gene_function_rnai description3 proteins_human_recombinant protein_domains_families_blocks_protein_families descriptions_aliases coding_end generif gap genome_databases_showing_hgnc_link thres do1_line little transcripts_highest_scoring_ests_link isMetabolic orthologs_ncbi_accessions_t7 gene_function_pubmed_ids_go_t2 gene_function_go_id_from_go_table protein_domains_blocks_protein_families_link transcripts_applied_biosystems_silencer_sirnas disorders_mutations_omim GENE_TRANSCRIPT_ID transcripts_rnai_link functionalstate transl_table sequence_acc db_accn9 function0 db_accn4 specialized_databases_showing_horde_link constantname constantvalue regtarget gene_function_primers_link expression_genenote_data_length_t6 exon_start proteins_evidence_from_go_table db_accn5 celltablelink1 previous_symbol tfid genome_databases_showing_aceview_link proteins_pdb_structures_from_proteopedia specialized_databases_showing_wikipedia_link gene_function_mgi_mutant_phenotypes status10 gene_location_end expression_geneannot_data_sensitivity_t6 summeries_ncbi_link proteins_refseq_proteins expression_data_from_biogps identity previous_name summaries_uniprot_link specialized_databases_showing_imgt_link protein_domains_families_uniprotkb dbd_classification_protein_group_protein_family proteins_assays proteins_antibodies proteins_ensembl_proteins gifts bracketing_genes summeries_entrezgene2 expression_tissue_specificity bs_genome_end proteins_qualified_go_term_from_go_table gene_function_sirna_link expression_data_from_cgap_sage_tag available_image expression_pattern downstream_of orthologs_gene_from_table gene_function_qualified_go_t2 snps_variants_ncbi_snps summeries_wiki transcripts_dots_entries gene_function_origene_untagged_cdna_clones_in_cmv_expression_ve transcripts_applied_biosystems_taqman_gene_expression_assays gene_function_origene_gfp_tagged_cdna_clones_in_cmv_expression_ genome_databases_showing_ensembl_link specialized_databases_showing_atlas_link bs_family specialized_databases_showing_genereviews_link orthologs_gene_t7 orthologs_ensembl_gene_tree_from_table summaries_function expression_genetide_data_gb_accession_t6 summeries_uniprot_function proteins_size pathways_interactions_qualified_go_term_go_t3 gene_function_primers pdbprotein_id ribosomal_slippage services codon_start drugs_compounds_links proteins_go_id_link_from_go_table transcripts_cdna_sequences_aceview_link specialinfo pathways_interactions_pubmed_ids_go_t3 old_format_pkey wormprot_id expression_genetide_data_score_t6 disorders_mutations_uniprotkb_swiss_prot transcripts_cdna_sequences_link summeries_wiki_link proteins_refseq_proteins_link drugs_compounds_action_t4 orthologs_organism_from_table fp_line codon proteins_secondary_accessions speciesurl wormprotid gene_location_orientation reference_url proteins_subcellular_location gene_function_go_id_from_go_table_link disorders_mutations_score_form_table unknown8 gene_location_entrez_geneis_link proteins_alternative_splicing expression_genenote_data_correlation_t6 summeries_uniprot epd_link_pkey

Examples:	Name/Synonym	External ID	Keywords	Wildcard/AND/OR
	EGFR ESR1 CDC42	ENST00000338799 x84746 2BIP	cancer neurodegenerative cholesterol	p53* Neurodeg* OR brain* p53* AND cancer*
Publications:	"IntegromeDB: an integrated system and biological search engine", BMC Genomics, 2012. "Semantic Integration of Data on Transcriptional Regulation.", Bioinformatics, 2010.
Explore the data:	Various kinds of public data returned by the IntegromeDB can be integratively analyzed directly from the search results page, using BiologicalNetworks research environment.